removeDoublets - TODO: example removeDoublets

Description¶

removeDoublets removes cells with multiple heavy chain sequences.

Usage¶

removeDoublets(
db,
cell_id = "cell_id",
locus = "locus",
sequence_id = "sequence_id",
fields = NULL
)

Arguments¶

db

data.frame with AIRR-format style columns.

cell_id

column in db containing cell identifiers

locus

column in db containing locus assignments

sequence_id

column in db containing locus assignments

fields

Columns in db, in addition to sample_id, that should be used to group sequences to be analyzed independently.

Value¶

The input data.frame (db) with doublets removed.