removeDoublets - TODO: example removeDoublets
Description¶
removeDoublets
removes cells with multiple heavy chain sequences.
Usage¶
removeDoublets(
db,
cell_id = "cell_id",
locus = "locus",
sequence_id = "sequence_id",
fields = NULL
)
Arguments¶
- db
- data.frame with AIRR-format style columns.
- cell_id
- column in
db
containing cell identifiers - locus
- column in
db
containing locus assignments - sequence_id
- column in
db
containing locus assignments - fields
- Columns in
db
, in addition tosample_id
, that should be used to group sequences to be analyzed independently.
Value¶
The input data.frame (db
) with doublets removed.